Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Mospd4-201ENSMUST00000180618 576 ntBASIC12.5□□□□□ -0.41
Vrk1Q80X41 Gm3890-201ENSMUST00000182416 207 ntBASIC12.5□□□□□ -0.41
Vrk1Q80X41 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.5□□□□□ -0.41
Vrk1Q80X41 Gm7046-201ENSMUST00000221351 977 ntBASIC12.5□□□□□ -0.41
Vrk1Q80X41 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.5□□□□□ -0.41
Vrk1Q80X41 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vrk1Q80X41 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Vrk1Q80X41 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Mir877-201ENSMUST00000104738 85 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm15808-201ENSMUST00000119046 604 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm12363-201ENSMUST00000122250 668 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm27320-201ENSMUST00000184892 109 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm28693-202ENSMUST00000190758 331 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm6621-201ENSMUST00000193251 772 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm37259-201ENSMUST00000193903 849 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.49□□□□□ -0.41
Vrk1Q80X41 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vrk1Q80X41 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm4986-201ENSMUST00000119731 549 ntBASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm14381-201ENSMUST00000122105 414 ntBASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.48□□□□□ -0.41
Vrk1Q80X41 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms