Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pcdh19Q80TF3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
Pcdh19Q80TF3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Pcdh19Q80TF3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh19Q80TF3 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.83□□□□□ -0.35
Pcdh19Q80TF3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pcdh19Q80TF3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdh19Q80TF3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm11978-201ENSMUST00000122315 466 ntBASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Olfr582-201ENSMUST00000098212 960 ntBASIC12.82□□□□□ -0.36
Pcdh19Q80TF3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms