Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm4909-201ENSMUST00000118749 794 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm16379-201ENSMUST00000161469 348 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm2991-201ENSMUST00000173338 480 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm24420-201ENSMUST00000176676 59 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm8762-201ENSMUST00000193486 339 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Gm8227-201ENSMUST00000223306 571 ntBASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
Prpf38bQ80SY5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm6754-201ENSMUST00000117124 913 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm12485-201ENSMUST00000119641 291 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Mir7032-201ENSMUST00000185154 79 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm8099-201ENSMUST00000200510 742 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf38bQ80SY5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Gm14017-201ENSMUST00000121934 386 ntBASIC13.71□□□□□ -0.21
Prpf38bQ80SY5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms