Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Grk6-205ENSMUST00000224653 2976 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.2□□□□□ -0.3
Nudcd1Q6PIP5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm37008-201ENSMUST00000195712 319 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm42627-201ENSMUST00000197347 224 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nudcd1Q6PIP5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm26185-201ENSMUST00000157692 266 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Mir6420-201ENSMUST00000185032 102 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm28693-202ENSMUST00000190758 331 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm43179-201ENSMUST00000198797 275 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nudcd1Q6PIP5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nudcd1Q6PIP5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms