Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Scaf4Q6PFF0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scaf4Q6PFF0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.35
Scaf4Q6PFF0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm11594-201ENSMUST00000122313 162 ntBASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm27430-201ENSMUST00000184585 107 ntBASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm44333-201ENSMUST00000197168 107 ntBASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Scaf4Q6PFF0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Gm43094-201ENSMUST00000196549 921 ntBASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.88□□□□□ -0.35
Scaf4Q6PFF0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scaf4Q6PFF0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms