Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm8712-201ENSMUST00000221090 701 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.47□□□□□ -0.57
Snrnp40Q6PE01 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Gm25043-201ENSMUST00000158604 212 ntBASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Snrnp40Q6PE01 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Snrnp40Q6PE01 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gm38092-201ENSMUST00000195600 653 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Snrnp40Q6PE01 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Snrnp40Q6PE01 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms