Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slx4Q6P1D7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm5778-201ENSMUST00000171003 1072 ntBASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm9230-201ENSMUST00000188228 532 ntBASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Mir7686-201ENSMUST00000200604 57 ntBASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm19287-201ENSMUST00000203190 358 ntBASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slx4Q6P1D7 Gm14150-201ENSMUST00000122404 1354 ntBASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slx4Q6P1D7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gm13888-201ENSMUST00000119148 422 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gm11675-201ENSMUST00000121873 832 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gm38210-201ENSMUST00000191944 809 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slx4Q6P1D7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slx4Q6P1D7 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms