Protein–RNA interactions for Protein: Q6DFW4

Nop58, Nucleolar protein 58, mousemouse

Known RBP Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop58Q6DFW4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Rprl2-201ENSMUST00000157150 290 ntBASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Mir3113-201ENSMUST00000175478 76 ntBASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.98■□□□□ 0.47
Nop58Q6DFW4 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.98■□□□□ 0.47
Nop58Q6DFW4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nop58Q6DFW4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm9824-201ENSMUST00000178707 561 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.97■□□□□ 0.47
Nop58Q6DFW4 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nop58Q6DFW4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Gm43365-201ENSMUST00000196522 2106 ntBASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Nop58Q6DFW4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nop58Q6DFW4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nop58Q6DFW4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nop58Q6DFW4 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nop58Q6DFW4 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Nop58Q6DFW4 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
Nop58Q6DFW4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms