Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Sdc3Q64519 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sdc3Q64519 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.61□□□□□ -0.39
Sdc3Q64519 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sdc3Q64519 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Gm45784-201ENSMUST00000188360 142 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 AY702102-202ENSMUST00000194651 1173 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Pck2-205ENSMUST00000226352 2784 ntBASIC12.6□□□□□ -0.39
Sdc3Q64519 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sdc3Q64519 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sdc3Q64519 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm14350-201ENSMUST00000116642 640 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm14660-201ENSMUST00000119809 575 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm27331-201ENSMUST00000183705 60 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sdc3Q64519 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm29705-201ENSMUST00000212598 474 ntBASIC12.59□□□□□ -0.39
Sdc3Q64519 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Sdc3Q64519 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sdc3Q64519 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms