Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.99□□□□□ -0.65
SspnQ62147 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.99□□□□□ -0.65
SspnQ62147 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SspnQ62147 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.99□□□□□ -0.65
SspnQ62147 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.99□□□□□ -0.65
SspnQ62147 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SspnQ62147 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Gm15678-201ENSMUST00000117573 960 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Gm24694-201ENSMUST00000180054 110 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Gm27663-201ENSMUST00000184839 110 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Gm17870-201ENSMUST00000219489 1174 ntBASIC10.98□□□□□ -0.65
SspnQ62147 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
SspnQ62147 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
SspnQ62147 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.98□□□□□ -0.65
SspnQ62147 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SspnQ62147 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
SspnQ62147 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SspnQ62147 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm12403-201ENSMUST00000121384 959 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.97□□□□□ -0.65
SspnQ62147 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.97□□□□□ -0.65
SspnQ62147 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.97□□□□□ -0.65
SspnQ62147 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
SspnQ62147 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
SspnQ62147 Gm5161-201ENSMUST00000075243 853 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Syt7-204ENSMUST00000223586 1344 ntBASIC10.97□□□□□ -0.65
SspnQ62147 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms