Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.95□□□□□ -0.5
VcanQ62059 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
VcanQ62059 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.94□□□□□ -0.5
VcanQ62059 Gm14644-201ENSMUST00000116671 647 ntBASIC11.94□□□□□ -0.5
VcanQ62059 Gm13809-201ENSMUST00000117921 597 ntBASIC11.94□□□□□ -0.5
VcanQ62059 Gm7985-201ENSMUST00000183329 981 ntBASIC11.94□□□□□ -0.5
VcanQ62059 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.94□□□□□ -0.5
VcanQ62059 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.94□□□□□ -0.5
VcanQ62059 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VcanQ62059 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
VcanQ62059 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.94□□□□□ -0.5
VcanQ62059 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
VcanQ62059 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VcanQ62059 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Gm28882-201ENSMUST00000185504 314 ntBASIC11.93□□□□□ -0.5
VcanQ62059 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Gm14704-201ENSMUST00000120300 874 ntBASIC11.93□□□□□ -0.5
VcanQ62059 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Gm37852-201ENSMUST00000193027 350 ntBASIC11.93□□□□□ -0.5
VcanQ62059 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VcanQ62059 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.93□□□□□ -0.5
VcanQ62059 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VcanQ62059 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Gm22144-201ENSMUST00000157402 102 ntBASIC11.92□□□□□ -0.5
VcanQ62059 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.92□□□□□ -0.5
VcanQ62059 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Gm16166-201ENSMUST00000118291 787 ntBASIC11.92□□□□□ -0.5
VcanQ62059 Gm9166-201ENSMUST00000120293 561 ntBASIC11.92□□□□□ -0.5
VcanQ62059 Gm12516-201ENSMUST00000120819 385 ntBASIC11.92□□□□□ -0.5
VcanQ62059 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.92□□□□□ -0.5
VcanQ62059 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VcanQ62059 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.92□□□□□ -0.5
VcanQ62059 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms