Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm25653-201ENSMUST00000158473 138 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm5354-201ENSMUST00000182417 973 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm37748-201ENSMUST00000194379 1140 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC9.82□□□□□ -0.84
Foxc1Q61572 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm5279-201ENSMUST00000199575 745 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm18624-201ENSMUST00000220966 658 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Ermard-209ENSMUST00000226561 1019 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 AC154683.1-201ENSMUST00000228409 1284 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm37785-201ENSMUST00000195783 2408 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm9279-201ENSMUST00000223175 1606 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Foxc1Q61572 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.82□□□□□ -0.84
Foxc1Q61572 Gm28359-201ENSMUST00000187470 1322 ntBASIC9.82□□□□□ -0.84
Foxc1Q61572 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm4984-201ENSMUST00000115987 360 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm15937-201ENSMUST00000120727 1235 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm11980-201ENSMUST00000121445 986 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC9.81□□□□□ -0.84
Foxc1Q61572 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm37213-201ENSMUST00000193077 586 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm44038-201ENSMUST00000203952 889 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm44582-201ENSMUST00000209125 445 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm45668-201ENSMUST00000211271 493 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.81□□□□□ -0.84
Foxc1Q61572 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Gm37644-201ENSMUST00000192190 2270 ntBASIC9.81□□□□□ -0.84
Foxc1Q61572 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms