Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm17794-201ENSMUST00000220252 955 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm26315-201ENSMUST00000083890 321 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.76□□□□□ -0.37
Vsx2Q61412 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vsx2Q61412 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.76□□□□□ -0.37
Vsx2Q61412 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vsx2Q61412 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.75□□□□□ -0.37
Vsx2Q61412 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm7287-201ENSMUST00000205267 602 ntBASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.75□□□□□ -0.37
Vsx2Q61412 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Vsx2Q61412 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vsx2Q61412 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Vsx2Q61412 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.74□□□□□ -0.37
Vsx2Q61412 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.74□□□□□ -0.37
Vsx2Q61412 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Gm27839-201ENSMUST00000184242 106 ntBASIC12.74□□□□□ -0.37
Vsx2Q61412 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.74□□□□□ -0.37
Vsx2Q61412 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Vsx2Q61412 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vsx2Q61412 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Vsx2Q61412 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.73□□□□□ -0.37
Vsx2Q61412 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Vsx2Q61412 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.73□□□□□ -0.37
Vsx2Q61412 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.73□□□□□ -0.37
Vsx2Q61412 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.73□□□□□ -0.37
Vsx2Q61412 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.73□□□□□ -0.37
Vsx2Q61412 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.73□□□□□ -0.37
Vsx2Q61412 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms