Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.32□□□□□ -0.12
Col11a1Q61245 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a1Q61245 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.32□□□□□ -0.12
Col11a1Q61245 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col11a1Q61245 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a1Q61245 Gm22133-201ENSMUST00000102082 109 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Col11a1Q61245 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm34023-201ENSMUST00000195539 217 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm3028-201ENSMUST00000213805 1119 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm13809-201ENSMUST00000117921 597 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.31□□□□□ -0.12
Col11a1Q61245 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm22144-201ENSMUST00000157402 102 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm6905-201ENSMUST00000205729 511 ntBASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col11a1Q61245 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a1Q61245 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Gm23085-201ENSMUST00000157849 293 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 Gm9358-201ENSMUST00000183067 927 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Gm44958-201ENSMUST00000203734 736 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.3□□□□□ -0.12
Col11a1Q61245 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col11a1Q61245 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a1Q61245 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms