Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.49□□□□□ -0.41
Nr1h4Q60641 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.49□□□□□ -0.41
Nr1h4Q60641 Gm6888-201ENSMUST00000221983 706 ntBASIC12.49□□□□□ -0.41
Nr1h4Q60641 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Nr1h4Q60641 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.48□□□□□ -0.41
Nr1h4Q60641 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.48□□□□□ -0.41
Nr1h4Q60641 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Gm27618-201ENSMUST00000183671 60 ntBASIC12.48□□□□□ -0.41
Nr1h4Q60641 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.48□□□□□ -0.41
Nr1h4Q60641 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Nr1h4Q60641 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm13453-201ENSMUST00000118708 357 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.47□□□□□ -0.41
Nr1h4Q60641 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms