Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Mir1982-201ENSMUST00000157368 74 ntBASIC12.51□□□□□ -0.41
Xrcc1Q60596 Gm4271-201ENSMUST00000174444 973 ntBASIC12.51□□□□□ -0.41
Xrcc1Q60596 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Gm43818-201ENSMUST00000200605 466 ntBASIC12.51□□□□□ -0.41
Xrcc1Q60596 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.51□□□□□ -0.41
Xrcc1Q60596 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Xrcc1Q60596 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.5□□□□□ -0.41
Xrcc1Q60596 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.5□□□□□ -0.41
Xrcc1Q60596 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.5□□□□□ -0.41
Xrcc1Q60596 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Xrcc1Q60596 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm13226-201ENSMUST00000117838 404 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm27731-201ENSMUST00000185192 107 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm18062-201ENSMUST00000208020 547 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm18055-201ENSMUST00000208254 547 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms