Protein–RNA interactions for Protein: Q5SSK3

Tefm, Transcription elongation factor, mitochondrial, mousemouse

Known RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TefmQ5SSK3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.05□□□□□ -0.48
TefmQ5SSK3 Gm18062-201ENSMUST00000208020 547 ntBASIC12.05□□□□□ -0.48
TefmQ5SSK3 Gm18055-201ENSMUST00000208254 547 ntBASIC12.05□□□□□ -0.48
TefmQ5SSK3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Gm18473-201ENSMUST00000220543 868 ntBASIC12.05□□□□□ -0.48
TefmQ5SSK3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.05□□□□□ -0.48
TefmQ5SSK3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
TefmQ5SSK3 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gm13829-201ENSMUST00000119600 138 ntBASIC12.04□□□□□ -0.48
TefmQ5SSK3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.04□□□□□ -0.48
TefmQ5SSK3 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.04□□□□□ -0.48
TefmQ5SSK3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.04□□□□□ -0.48
TefmQ5SSK3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
TefmQ5SSK3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gm27839-201ENSMUST00000184242 106 ntBASIC12.03□□□□□ -0.48
TefmQ5SSK3 Gm6266-201ENSMUST00000203844 806 ntBASIC12.03□□□□□ -0.48
TefmQ5SSK3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TefmQ5SSK3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.03□□□□□ -0.48
TefmQ5SSK3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TefmQ5SSK3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms