Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm26461-201ENSMUST00000175064 290 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm13097-201ENSMUST00000210722 397 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm5950-201ENSMUST00000213337 772 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.29□□□□□ -0.28
Spire1Q52KF3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.29□□□□□ -0.28
Spire1Q52KF3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.28□□□□□ -0.28
Spire1Q52KF3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Spire1Q52KF3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Daam2-202ENSMUST00000224595 1926 ntBASIC13.27□□□□□ -0.28
Spire1Q52KF3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Spire1Q52KF3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Spire1Q52KF3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spire1Q52KF3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Spire1Q52KF3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms