Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm13408-201ENSMUST00000119822 798 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm13935-201ENSMUST00000121859 798 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Gm23119-201ENSMUST00000158610 140 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 AC125486.1-201ENSMUST00000218701 320 ntBASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Arhgef40Q3UPH7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Arhgef40Q3UPH7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Gm8194-201ENSMUST00000159783 859 ntBASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Arhgef40Q3UPH7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Gm15515-201ENSMUST00000117827 822 ntBASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Arhgef40Q3UPH7 Gm13045-201ENSMUST00000119019 712 ntBASIC18.84■□□□□ 0.61
Arhgef40Q3UPH7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Arhgef40Q3UPH7 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Arhgef40Q3UPH7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Arhgef40Q3UPH7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Arhgef40Q3UPH7 Gm10752-201ENSMUST00000218348 729 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms