Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.3■□□□□ 0.04
Col5a2Q3U962 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col5a2Q3U962 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm7851-201ENSMUST00000117574 323 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm15432-201ENSMUST00000121106 195 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm45550-201ENSMUST00000209380 946 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 AC132901.1-201ENSMUST00000224345 508 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.29■□□□□ 0.04
Col5a2Q3U962 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col5a2Q3U962 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Col5a2Q3U962 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms