Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm7222-201ENSMUST00000117512 906 ntBASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm2272-201ENSMUST00000194903 582 ntBASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccbe1Q3MI99 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.83□□□□□ -0.51
Ccbe1Q3MI99 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gm10175-201ENSMUST00000086013 645 ntBASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccbe1Q3MI99 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms