Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Mir8115-201ENSMUST00000184992 119 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Gm34023-201ENSMUST00000195539 217 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Gm2965-201ENSMUST00000198365 343 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 CT009713.8-202ENSMUST00000224732 385 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 CT030637.1-201ENSMUST00000228016 669 ntBASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trpm1Q2TV84 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trpm1Q2TV84 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Rn7s6-201ENSMUST00000175005 291 ntBASIC18.08■□□□□ 0.48
Trpm1Q2TV84 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Gm9358-201ENSMUST00000183067 927 ntBASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 AC151275.1-201ENSMUST00000224870 585 ntBASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Trpm1Q2TV84 Gm7114-201ENSMUST00000190159 1789 ntBASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm8100-201ENSMUST00000182906 988 ntBASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm18893-201ENSMUST00000198416 943 ntBASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm10288-201ENSMUST00000084614 537 ntBASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC18.07■□□□□ 0.48
Trpm1Q2TV84 Gm7049-201ENSMUST00000223520 1712 ntBASIC18.06■□□□□ 0.48
Trpm1Q2TV84 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms