Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ptchd3Q0EEE2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Gm15487-201ENSMUST00000122373 465 ntBASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Gm9522-201ENSMUST00000182394 926 ntBASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ptchd3Q0EEE2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Mir8102-201ENSMUST00000184148 139 ntBASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Gm20949-201ENSMUST00000206478 952 ntBASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ptchd3Q0EEE2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Mir874-201ENSMUST00000104769 76 ntBASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Mir7023-201ENSMUST00000185093 64 ntBASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ptchd3Q0EEE2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms