Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.69□□□□□ -0.38
Atf4Q06507 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Atf4Q06507 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.69□□□□□ -0.38
Atf4Q06507 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.69□□□□□ -0.38
Atf4Q06507 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Atf4Q06507 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Atf4Q06507 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.68□□□□□ -0.38
Atf4Q06507 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.68□□□□□ -0.38
Atf4Q06507 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.68□□□□□ -0.38
Atf4Q06507 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC12.68□□□□□ -0.38
Atf4Q06507 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.68□□□□□ -0.38
Atf4Q06507 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 AC154424.1-201ENSMUST00000225883 799 ntBASIC12.68□□□□□ -0.38
Atf4Q06507 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Gm17415-201ENSMUST00000096427 789 ntBASIC12.68□□□□□ -0.38
Atf4Q06507 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Atf4Q06507 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf4Q06507 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.68□□□□□ -0.38
Atf4Q06507 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf4Q06507 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm13612-201ENSMUST00000119276 390 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm26464-201ENSMUST00000157094 305 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atf4Q06507 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Atf4Q06507 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm37517-201ENSMUST00000194004 1289 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 Gm19175-201ENSMUST00000199895 916 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC12.67□□□□□ -0.38
Atf4Q06507 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC12.67□□□□□ -0.38
Atf4Q06507 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.67□□□□□ -0.38
Atf4Q06507 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf4Q06507 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms