Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm8213-201ENSMUST00000118191 441 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm24196-201ENSMUST00000179161 110 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm27847-201ENSMUST00000183711 107 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm27375-201ENSMUST00000183799 107 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm19931-201ENSMUST00000198920 368 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.07□□□□□ -0.48
Col10a1Q05306 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Col10a1Q05306 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.07□□□□□ -0.48
Col10a1Q05306 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col10a1Q05306 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm4984-201ENSMUST00000115987 360 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm11618-201ENSMUST00000117946 267 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm22331-201ENSMUST00000158066 136 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm6091-201ENSMUST00000098307 165 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col10a1Q05306 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.06□□□□□ -0.48
Col10a1Q05306 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col10a1Q05306 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Col10a1Q05306 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Col10a1Q05306 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Col10a1Q05306 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.05□□□□□ -0.48
Col10a1Q05306 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col10a1Q05306 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms