Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.97□□□□□ -0.65
Npas1P97459 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Npas1P97459 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Npas1P97459 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.96□□□□□ -0.65
Npas1P97459 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.96□□□□□ -0.65
Npas1P97459 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.96□□□□□ -0.65
Npas1P97459 Gm12428-201ENSMUST00000119844 727 ntBASIC10.96□□□□□ -0.65
Npas1P97459 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Npas1P97459 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Npas1P97459 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Gm45683-201ENSMUST00000210825 1247 ntBASIC10.96□□□□□ -0.65
Npas1P97459 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Npas1P97459 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Npas1P97459 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.96□□□□□ -0.66
Npas1P97459 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Npas1P97459 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Npas1P97459 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Npas1P97459 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Npas1P97459 Gm4995-201ENSMUST00000117247 432 ntBASIC10.95□□□□□ -0.66
Npas1P97459 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms