Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Gm28678-201ENSMUST00000191593 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm20910-201ENSMUST00000193268 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Gm21871-201ENSMUST00000194621 696 ntBASIC12.16□□□□□ -0.46
SgcdP82347 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.16□□□□□ -0.46
SgcdP82347 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.16□□□□□ -0.46
SgcdP82347 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
SgcdP82347 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.16□□□□□ -0.46
SgcdP82347 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
SgcdP82347 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
SgcdP82347 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Syt7-204ENSMUST00000223586 1344 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
SgcdP82347 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.15□□□□□ -0.46
SgcdP82347 Gm14719-201ENSMUST00000121891 340 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Gm27838-201ENSMUST00000184829 128 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Gm44344-201ENSMUST00000200287 129 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Gm18027-201ENSMUST00000218947 619 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Gm9063-201ENSMUST00000223299 582 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.15□□□□□ -0.46
SgcdP82347 BC001981-202ENSMUST00000191393 1545 ntBASIC12.15□□□□□ -0.46
SgcdP82347 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
SgcdP82347 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SgcdP82347 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SgcdP82347 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcdP82347 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcdP82347 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcdP82347 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
SgcdP82347 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SgcdP82347 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
SgcdP82347 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SgcdP82347 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SgcdP82347 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.14□□□□□ -0.47
SgcdP82347 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms