Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC9.34□□□□□ -0.91
Cks1bP61025 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Cks1bP61025 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC9.34□□□□□ -0.91
Cks1bP61025 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Gm17271-201ENSMUST00000165535 355 ntBASIC9.34□□□□□ -0.91
Cks1bP61025 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.34□□□□□ -0.91
Cks1bP61025 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC9.34□□□□□ -0.91
Cks1bP61025 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.34□□□□□ -0.91
Cks1bP61025 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Cks1bP61025 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
Cks1bP61025 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC9.34□□□□□ -0.91
Cks1bP61025 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Cks1bP61025 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Cks1bP61025 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
Cks1bP61025 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
Cks1bP61025 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Cks1bP61025 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.33□□□□□ -0.92
Cks1bP61025 Gm15957-201ENSMUST00000118893 974 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Gm14140-201ENSMUST00000119999 995 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Gm12350-201ENSMUST00000121208 462 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 AA543401-201ENSMUST00000164248 1269 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Gm45706-201ENSMUST00000213063 2136 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Gm5035-201ENSMUST00000215581 927 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 AC154222.1-201ENSMUST00000223882 475 ntBASIC9.33□□□□□ -0.92
Cks1bP61025 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cks1bP61025 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Cks1bP61025 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.33□□□□□ -0.92
Cks1bP61025 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Cks1bP61025 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms