Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sssca1P56873 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm12537-201ENSMUST00000119266 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm12070-201ENSMUST00000119551 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm12671-201ENSMUST00000119978 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm13292-201ENSMUST00000120014 1000 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm12403-201ENSMUST00000121384 959 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm2756-201ENSMUST00000195851 400 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm43514-201ENSMUST00000198852 424 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm6888-201ENSMUST00000221983 706 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.57□□□□□ -0.72
Sssca1P56873 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Sssca1P56873 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Sssca1P56873 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sssca1P56873 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.57□□□□□ -0.72
Sssca1P56873 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Sssca1P56873 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sssca1P56873 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Sssca1P56873 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Sssca1P56873 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sssca1P56873 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sssca1P56873 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm27680-201ENSMUST00000184192 160 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Gm27321-201ENSMUST00000185021 205 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.56□□□□□ -0.72
Sssca1P56873 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 CT573086.1-201ENSMUST00000227202 1074 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Sssca1P56873 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.56□□□□□ -0.72
Sssca1P56873 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.56□□□□□ -0.72
Sssca1P56873 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sssca1P56873 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Sssca1P56873 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.55□□□□□ -0.72
Sssca1P56873 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Sssca1P56873 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sssca1P56873 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.55□□□□□ -0.72
Sssca1P56873 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms