Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RoraP51448 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
RoraP51448 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.38□□□□□ -0.43
RoraP51448 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
RoraP51448 Gm2231-201ENSMUST00000125661 612 ntBASIC12.38□□□□□ -0.43
RoraP51448 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.38□□□□□ -0.43
RoraP51448 Gm25927-201ENSMUST00000175058 117 ntBASIC12.38□□□□□ -0.43
RoraP51448 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.38□□□□□ -0.43
RoraP51448 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm37008-201ENSMUST00000195712 319 ntBASIC12.38□□□□□ -0.43
RoraP51448 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.38□□□□□ -0.43
RoraP51448 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.38□□□□□ -0.43
RoraP51448 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm9823-201ENSMUST00000051212 327 ntBASIC12.38□□□□□ -0.43
RoraP51448 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RoraP51448 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
RoraP51448 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.38□□□□□ -0.43
RoraP51448 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.38□□□□□ -0.43
RoraP51448 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
RoraP51448 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.38□□□□□ -0.43
RoraP51448 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
RoraP51448 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
RoraP51448 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
RoraP51448 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.37□□□□□ -0.43
RoraP51448 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.37□□□□□ -0.43
RoraP51448 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.37□□□□□ -0.43
RoraP51448 Gm43179-201ENSMUST00000198797 275 ntBASIC12.37□□□□□ -0.43
RoraP51448 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.37□□□□□ -0.43
RoraP51448 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.37□□□□□ -0.43
RoraP51448 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RoraP51448 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms