Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.38□□□□□ -0.27
SftpbP50405 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SftpbP50405 Gm28760-201ENSMUST00000185995 736 ntBASIC13.38□□□□□ -0.27
SftpbP50405 Gm19931-201ENSMUST00000198920 368 ntBASIC13.38□□□□□ -0.27
SftpbP50405 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.38□□□□□ -0.27
SftpbP50405 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SftpbP50405 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
SftpbP50405 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
SftpbP50405 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SftpbP50405 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
SftpbP50405 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.37□□□□□ -0.27
SftpbP50405 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Mir8102-201ENSMUST00000184148 139 ntBASIC13.37□□□□□ -0.27
SftpbP50405 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.37□□□□□ -0.27
SftpbP50405 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.37□□□□□ -0.27
SftpbP50405 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.37□□□□□ -0.27
SftpbP50405 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SftpbP50405 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SftpbP50405 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.37□□□□□ -0.27
SftpbP50405 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.37□□□□□ -0.27
SftpbP50405 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SftpbP50405 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SftpbP50405 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SftpbP50405 Mir7684-201ENSMUST00000183858 60 ntBASIC13.36□□□□□ -0.27
SftpbP50405 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.36□□□□□ -0.27
SftpbP50405 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.36□□□□□ -0.27
SftpbP50405 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SftpbP50405 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.36□□□□□ -0.27
SftpbP50405 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SftpbP50405 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.36□□□□□ -0.27
SftpbP50405 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.35□□□□□ -0.27
SftpbP50405 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SftpbP50405 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms