Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Mir449b-201ENSMUST00000104833 80 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm15693-201ENSMUST00000120470 637 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm29541-201ENSMUST00000191351 678 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.84□□□□□ -0.67
Nkx2-1P50220 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx2-1P50220 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Nkx2-1P50220 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Gm43575-201ENSMUST00000196420 516 ntBASIC10.83□□□□□ -0.68
Nkx2-1P50220 Gm19931-201ENSMUST00000198920 368 ntBASIC10.83□□□□□ -0.68
Nkx2-1P50220 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.83□□□□□ -0.68
Nkx2-1P50220 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Nkx2-1P50220 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gm6912-201ENSMUST00000117218 544 ntBASIC10.82□□□□□ -0.68
Nkx2-1P50220 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms