Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atoh1P48985 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atoh1P48985 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atoh1P48985 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Atoh1P48985 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.68□□□□□ -0.06
Atoh1P48985 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.68□□□□□ -0.06
Atoh1P48985 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.68□□□□□ -0.06
Atoh1P48985 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.68□□□□□ -0.06
Atoh1P48985 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Atoh1P48985 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Atoh1P48985 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Atoh1P48985 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Atoh1P48985 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.67□□□□□ -0.06
Atoh1P48985 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Atoh1P48985 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.67□□□□□ -0.06
Atoh1P48985 Gm11628-201ENSMUST00000117568 171 ntBASIC14.67□□□□□ -0.06
Atoh1P48985 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Gm24845-201ENSMUST00000158034 109 ntBASIC14.67□□□□□ -0.06
Atoh1P48985 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.67□□□□□ -0.06
Atoh1P48985 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Atoh1P48985 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Atoh1P48985 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
Atoh1P48985 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Atoh1P48985 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.66□□□□□ -0.06
Atoh1P48985 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Atoh1P48985 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Atoh1P48985 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Atoh1P48985 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.66□□□□□ -0.06
Atoh1P48985 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.66□□□□□ -0.06
Atoh1P48985 Gm14999-201ENSMUST00000121039 624 ntBASIC14.66□□□□□ -0.06
Atoh1P48985 Gm14665-201ENSMUST00000122294 557 ntBASIC14.66□□□□□ -0.06
Atoh1P48985 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.66□□□□□ -0.06
Atoh1P48985 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Atoh1P48985 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Atoh1P48985 Gm8018-201ENSMUST00000173536 789 ntBASIC14.66□□□□□ -0.06
Atoh1P48985 Gm37666-201ENSMUST00000194110 866 ntBASIC14.66□□□□□ -0.06
Atoh1P48985 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Atoh1P48985 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Atoh1P48985 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms