Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Sybu-209ENSMUST00000228639 4113 ntBASIC14.39□□□□□ -0.11
Brca1P48754 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Gm14058-201ENSMUST00000116082 735 ntBASIC14.39□□□□□ -0.11
Brca1P48754 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.39□□□□□ -0.11
Brca1P48754 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.39□□□□□ -0.11
Brca1P48754 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.39□□□□□ -0.11
Brca1P48754 Gm8492-201ENSMUST00000182375 987 ntBASIC14.39□□□□□ -0.11
Brca1P48754 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Brca1P48754 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.39□□□□□ -0.11
Brca1P48754 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.39□□□□□ -0.11
Brca1P48754 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Brca1P48754 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Gm23251-201ENSMUST00000103773 110 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Brca1P48754 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.38□□□□□ -0.11
Brca1P48754 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Gm18893-201ENSMUST00000198416 943 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Brca1P48754 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Gm13047-201ENSMUST00000117116 815 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Gm11340-201ENSMUST00000119226 412 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.38□□□□□ -0.11
Brca1P48754 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Gm28882-201ENSMUST00000185504 314 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Brca1P48754 Gm10076-201ENSMUST00000073238 384 ntBASIC14.38□□□□□ -0.11
Brca1P48754 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Brca1P48754 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Brca1P48754 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.37□□□□□ -0.11
Brca1P48754 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.37□□□□□ -0.11
Brca1P48754 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.37□□□□□ -0.11
Brca1P48754 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.37□□□□□ -0.11
Brca1P48754 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.37□□□□□ -0.11
Brca1P48754 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.37□□□□□ -0.11
Brca1P48754 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Brca1P48754 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.37□□□□□ -0.11
Brca1P48754 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.37□□□□□ -0.11
Brca1P48754 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms