Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps4bP46467 Gm6745-201ENSMUST00000199216 526 ntBASIC13.29□□□□□ -0.28
Vps4bP46467 Gm45384-201ENSMUST00000210451 277 ntBASIC13.29□□□□□ -0.28
Vps4bP46467 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.29□□□□□ -0.28
Vps4bP46467 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.29□□□□□ -0.28
Vps4bP46467 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Vps4bP46467 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vps4bP46467 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps4bP46467 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vps4bP46467 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Vps4bP46467 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.28□□□□□ -0.28
Vps4bP46467 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.28□□□□□ -0.28
Vps4bP46467 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Vps4bP46467 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vps4bP46467 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vps4bP46467 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.27□□□□□ -0.28
Vps4bP46467 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Vps4bP46467 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Vps4bP46467 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vps4bP46467 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Vps4bP46467 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Vps4bP46467 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps4bP46467 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps4bP46467 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.27□□□□□ -0.29
Vps4bP46467 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.27□□□□□ -0.29
Vps4bP46467 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.27□□□□□ -0.29
Vps4bP46467 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms