Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.37□□□□□ -0.43
Nkx2-6P43688 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nkx2-6P43688 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.36□□□□□ -0.43
Nkx2-6P43688 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm13297-201ENSMUST00000120205 934 ntBASIC12.36□□□□□ -0.43
Nkx2-6P43688 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm38158-201ENSMUST00000194617 339 ntBASIC12.36□□□□□ -0.43
Nkx2-6P43688 Gm38341-201ENSMUST00000195357 515 ntBASIC12.36□□□□□ -0.43
Nkx2-6P43688 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.36□□□□□ -0.43
Nkx2-6P43688 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nkx2-6P43688 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm7584-201ENSMUST00000175829 940 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm21769-201ENSMUST00000211922 111 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm5781-201ENSMUST00000219792 443 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Cts7-204ENSMUST00000225321 1257 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.35□□□□□ -0.43
Nkx2-6P43688 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nkx2-6P43688 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms