Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Gm8885-201ENSMUST00000189382 598 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 Gm38092-201ENSMUST00000195600 653 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 Gm42997-202ENSMUST00000200321 985 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 Gm44262-201ENSMUST00000204969 372 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.38□□□□□ -0.43
Cdx2P43241 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Cdx2P43241 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cdx2P43241 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cdx2P43241 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.37□□□□□ -0.43
Cdx2P43241 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.37□□□□□ -0.43
Cdx2P43241 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
Cdx2P43241 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm12058-201ENSMUST00000118614 437 ntBASIC12.37□□□□□ -0.43
Cdx2P43241 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.37□□□□□ -0.43
Cdx2P43241 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Cdx2P43241 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cdx2P43241 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.37□□□□□ -0.43
Cdx2P43241 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cdx2P43241 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.36□□□□□ -0.43
Cdx2P43241 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Cdx2P43241 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Cdx2P43241 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm25043-201ENSMUST00000158604 212 ntBASIC12.36□□□□□ -0.43
Cdx2P43241 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cdx2P43241 Gm23363-201ENSMUST00000175024 79 ntBASIC12.36□□□□□ -0.43
Cdx2P43241 Gm25700-201ENSMUST00000177693 110 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms