Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm9463-201ENSMUST00000206707 601 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm18626-201ENSMUST00000221512 1409 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm44291-201ENSMUST00000203102 2865 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm11675-201ENSMUST00000121873 832 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm23119-201ENSMUST00000158610 140 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm22138-201ENSMUST00000158748 128 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.59■□□□□ 0.57
Kdm5cP41230 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Kdm5cP41230 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18.59■□□□□ 0.57
Kdm5cP41230 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kdm5cP41230 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kdm5cP41230 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Kdm5cP41230 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Kdm5cP41230 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Gm8199-201ENSMUST00000121323 823 ntBASIC18.58■□□□□ 0.56
Kdm5cP41230 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC18.58■□□□□ 0.56
Kdm5cP41230 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.58■□□□□ 0.56
Kdm5cP41230 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC18.58■□□□□ 0.56
Kdm5cP41230 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18.58■□□□□ 0.56
Kdm5cP41230 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18.58■□□□□ 0.56
Kdm5cP41230 AC099645.1-201ENSMUST00000226476 1105 ntBASIC18.58■□□□□ 0.56
Kdm5cP41230 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Kdm5cP41230 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm11989-201ENSMUST00000117240 672 ntBASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm12795-201ENSMUST00000117594 539 ntBASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm11362-201ENSMUST00000118838 850 ntBASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Ap5m1-205ENSMUST00000227431 3757 ntBASIC18.57■□□□□ 0.56
Kdm5cP41230 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Kdm5cP41230 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Kdm5cP41230 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kdm5cP41230 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kdm5cP41230 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Kdm5cP41230 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC18.56■□□□□ 0.56
Kdm5cP41230 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Kdm5cP41230 Gm42682-201ENSMUST00000198349 1265 ntBASIC18.56■□□□□ 0.56
Kdm5cP41230 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC18.56■□□□□ 0.56
Kdm5cP41230 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Kdm5cP41230 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Kdm5cP41230 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC18.56■□□□□ 0.56
Kdm5cP41230 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms