Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.68□□□□□ -0.38
TfamP40630 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.68□□□□□ -0.38
TfamP40630 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.68□□□□□ -0.38
TfamP40630 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.68□□□□□ -0.38
TfamP40630 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.68□□□□□ -0.38
TfamP40630 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TfamP40630 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.68□□□□□ -0.38
TfamP40630 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.68□□□□□ -0.38
TfamP40630 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TfamP40630 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TfamP40630 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.67□□□□□ -0.38
TfamP40630 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.67□□□□□ -0.38
TfamP40630 Gm14057-201ENSMUST00000120631 482 ntBASIC12.67□□□□□ -0.38
TfamP40630 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.67□□□□□ -0.38
TfamP40630 Gm38223-201ENSMUST00000194484 695 ntBASIC12.67□□□□□ -0.38
TfamP40630 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.67□□□□□ -0.38
TfamP40630 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.67□□□□□ -0.38
TfamP40630 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.67□□□□□ -0.38
TfamP40630 Gm26315-201ENSMUST00000083890 321 ntBASIC12.67□□□□□ -0.38
TfamP40630 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.67□□□□□ -0.38
TfamP40630 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.67□□□□□ -0.38
TfamP40630 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TfamP40630 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TfamP40630 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.67□□□□□ -0.38
TfamP40630 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TfamP40630 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TfamP40630 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.66□□□□□ -0.38
TfamP40630 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
TfamP40630 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.66□□□□□ -0.38
TfamP40630 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.66□□□□□ -0.38
TfamP40630 Gm6218-201ENSMUST00000219812 628 ntBASIC12.66□□□□□ -0.38
TfamP40630 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.66□□□□□ -0.38
TfamP40630 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TfamP40630 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.66□□□□□ -0.38
TfamP40630 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms