Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Upk2P38575 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk2P38575 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk2P38575 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.47□□□□□ -0.57
Upk2P38575 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk2P38575 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Upk2P38575 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Mir686-201ENSMUST00000102174 109 ntBASIC11.46□□□□□ -0.57
Upk2P38575 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 Gm6745-201ENSMUST00000199216 526 ntBASIC11.46□□□□□ -0.57
Upk2P38575 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 Gm6458-201ENSMUST00000211573 635 ntBASIC11.46□□□□□ -0.57
Upk2P38575 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.46□□□□□ -0.57
Upk2P38575 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.46□□□□□ -0.57
Upk2P38575 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Upk2P38575 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Upk2P38575 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Upk2P38575 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Upk2P38575 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Upk2P38575 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Upk2P38575 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Upk2P38575 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Upk2P38575 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Upk2P38575 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.45□□□□□ -0.58
Upk2P38575 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.45□□□□□ -0.58
Upk2P38575 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.45□□□□□ -0.58
Upk2P38575 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.45□□□□□ -0.58
Upk2P38575 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.45□□□□□ -0.58
Upk2P38575 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Upk2P38575 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.45□□□□□ -0.58
Upk2P38575 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Upk2P38575 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Upk2P38575 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Upk2P38575 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.44□□□□□ -0.58
Upk2P38575 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms