Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Thbs1P35441 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.13□□□□□ -0.47
Thbs1P35441 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Gm11978-201ENSMUST00000122315 466 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
Thbs1P35441 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Mir6392-201ENSMUST00000184924 108 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 Gm18187-201ENSMUST00000196476 984 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.13□□□□□ -0.47
Thbs1P35441 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.13□□□□□ -0.47
Thbs1P35441 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thbs1P35441 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thbs1P35441 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thbs1P35441 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Gm5244-202ENSMUST00000189517 743 ntBASIC12.12□□□□□ -0.47
Thbs1P35441 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.12□□□□□ -0.47
Thbs1P35441 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.12□□□□□ -0.47
Thbs1P35441 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.12□□□□□ -0.47
Thbs1P35441 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.12□□□□□ -0.47
Thbs1P35441 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thbs1P35441 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Thbs1P35441 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Thbs1P35441 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thbs1P35441 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms