Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cd40lgP27548 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cd40lgP27548 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 Gm43433-201ENSMUST00000196573 481 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.09□□□□□ -0.47
Cd40lgP27548 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.09□□□□□ -0.47
Cd40lgP27548 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cd40lgP27548 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.47
Cd40lgP27548 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cd40lgP27548 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm15678-201ENSMUST00000117573 960 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm6244-201ENSMUST00000178732 841 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Itm2b-204ENSMUST00000228637 783 ntBASIC12.08□□□□□ -0.48
Cd40lgP27548 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.08□□□□□ -0.48
Cd40lgP27548 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cd40lgP27548 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms