Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmga1P17095 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.31□□□□□ -0.28
Hmga1P17095 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmga1P17095 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmga1P17095 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmga1P17095 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmga1P17095 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Hmga1P17095 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.3□□□□□ -0.28
Hmga1P17095 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.3□□□□□ -0.28
Hmga1P17095 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hmga1P17095 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Gm27243-201ENSMUST00000183964 521 ntBASIC13.3□□□□□ -0.28
Hmga1P17095 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.3□□□□□ -0.28
Hmga1P17095 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Mir339-201ENSMUST00000083659 96 ntBASIC13.3□□□□□ -0.28
Hmga1P17095 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hmga1P17095 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.3□□□□□ -0.28
Hmga1P17095 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Hmga1P17095 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmga1P17095 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm11222-201ENSMUST00000119005 738 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm4857-201ENSMUST00000192718 785 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Hmga1P17095 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Grk6-205ENSMUST00000224653 2976 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hmga1P17095 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.29□□□□□ -0.28
Hmga1P17095 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.29□□□□□ -0.28
Hmga1P17095 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Hmga1P17095 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Hmga1P17095 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hmga1P17095 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms