Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ApoeP08226 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.38□□□□□ -0.43
ApoeP08226 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ApoeP08226 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.38□□□□□ -0.43
ApoeP08226 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.38□□□□□ -0.43
ApoeP08226 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.38□□□□□ -0.43
ApoeP08226 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
ApoeP08226 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
ApoeP08226 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.38□□□□□ -0.43
ApoeP08226 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ApoeP08226 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.37□□□□□ -0.43
ApoeP08226 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.37□□□□□ -0.43
ApoeP08226 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.37□□□□□ -0.43
ApoeP08226 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.37□□□□□ -0.43
ApoeP08226 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Gm38144-201ENSMUST00000192790 465 ntBASIC12.37□□□□□ -0.43
ApoeP08226 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.37□□□□□ -0.43
ApoeP08226 Gm7774-201ENSMUST00000200064 533 ntBASIC12.37□□□□□ -0.43
ApoeP08226 Gm43703-201ENSMUST00000200523 763 ntBASIC12.37□□□□□ -0.43
ApoeP08226 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Gm5161-201ENSMUST00000075243 853 ntBASIC12.37□□□□□ -0.43
ApoeP08226 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.37□□□□□ -0.43
ApoeP08226 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.37□□□□□ -0.43
ApoeP08226 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
ApoeP08226 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.37□□□□□ -0.43
ApoeP08226 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
ApoeP08226 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.36□□□□□ -0.43
ApoeP08226 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.36□□□□□ -0.43
ApoeP08226 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
ApoeP08226 Matn2-203ENSMUST00000226766 3252 ntBASIC12.36□□□□□ -0.43
ApoeP08226 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
ApoeP08226 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
ApoeP08226 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.36□□□□□ -0.43
ApoeP08226 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.36□□□□□ -0.43
ApoeP08226 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.36□□□□□ -0.43
ApoeP08226 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
ApoeP08226 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms