Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.08□□□□□ -0.48
Cops4O88544 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cops4O88544 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.07□□□□□ -0.48
Cops4O88544 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cops4O88544 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Cops4O88544 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.07□□□□□ -0.48
Cops4O88544 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cops4O88544 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.07□□□□□ -0.48
Cops4O88544 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.07□□□□□ -0.48
Cops4O88544 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cops4O88544 Gm15393-201ENSMUST00000120499 219 ntBASIC12.07□□□□□ -0.48
Cops4O88544 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.07□□□□□ -0.48
Cops4O88544 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.07□□□□□ -0.48
Cops4O88544 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cops4O88544 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.07□□□□□ -0.48
Cops4O88544 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cops4O88544 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cops4O88544 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.07□□□□□ -0.48
Cops4O88544 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cops4O88544 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Gm22175-201ENSMUST00000175007 78 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.06□□□□□ -0.48
Cops4O88544 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.06□□□□□ -0.48
Cops4O88544 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.06□□□□□ -0.48
Cops4O88544 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.06□□□□□ -0.48
Cops4O88544 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.06□□□□□ -0.48
Cops4O88544 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Cops4O88544 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cops4O88544 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cops4O88544 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.06□□□□□ -0.48
Cops4O88544 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms