Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nsd1-205ENSMUST00000224693 852 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.35□□□□□ -0.11
Trdmt1O55055 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trdmt1O55055 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trdmt1O55055 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trdmt1O55055 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.34□□□□□ -0.11
Trdmt1O55055 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Gm44405-201ENSMUST00000198952 126 ntBASIC14.34□□□□□ -0.11
Trdmt1O55055 Gm45925-201ENSMUST00000218882 744 ntBASIC14.34□□□□□ -0.11
Trdmt1O55055 Gm8712-201ENSMUST00000221090 701 ntBASIC14.34□□□□□ -0.11
Trdmt1O55055 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.34□□□□□ -0.11
Trdmt1O55055 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trdmt1O55055 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trdmt1O55055 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Trdmt1O55055 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trdmt1O55055 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
Trdmt1O55055 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Trdmt1O55055 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm13736-201ENSMUST00000119272 253 ntBASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm14277-201ENSMUST00000121195 360 ntBASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Mir5120-201ENSMUST00000175020 78 ntBASIC14.33□□□□□ -0.12
Trdmt1O55055 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.33□□□□□ -0.12
Trdmt1O55055 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trdmt1O55055 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.33□□□□□ -0.12
Trdmt1O55055 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trdmt1O55055 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms