Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Matn3O35701 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Matn3O35701 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Matn3O35701 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.87□□□□□ -0.51
Matn3O35701 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Matn3O35701 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Matn3O35701 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.87□□□□□ -0.51
Matn3O35701 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Matn3O35701 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.87□□□□□ -0.51
Matn3O35701 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.87□□□□□ -0.51
Matn3O35701 Gm18737-201ENSMUST00000173594 937 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Gm18889-201ENSMUST00000174284 929 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Gm8927-201ENSMUST00000181978 981 ntBASIC11.87□□□□□ -0.51
Matn3O35701 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.87□□□□□ -0.51
Matn3O35701 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Gm3222-201ENSMUST00000071282 990 ntBASIC11.87□□□□□ -0.51
Matn3O35701 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Matn3O35701 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Matn3O35701 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Matn3O35701 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Gm2810-201ENSMUST00000118681 990 ntBASIC11.86□□□□□ -0.51
Matn3O35701 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.86□□□□□ -0.51
Matn3O35701 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.86□□□□□ -0.51
Matn3O35701 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Gm44124-201ENSMUST00000204159 472 ntBASIC11.86□□□□□ -0.51
Matn3O35701 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.86□□□□□ -0.51
Matn3O35701 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.86□□□□□ -0.51
Matn3O35701 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Matn3O35701 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Matn3O35701 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms