Protein–RNA interactions for Protein: O35324

Sh2d1b, SH2 domain-containing protein 1B, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1bO35324 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Gm16296-201ENSMUST00000159905 325 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Gm44405-201ENSMUST00000198952 126 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sh2d1bO35324 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.08□□□□□ -0.48
Sh2d1bO35324 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.07□□□□□ -0.48
Sh2d1bO35324 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm27023-201ENSMUST00000182372 285 ntBASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.07□□□□□ -0.48
Sh2d1bO35324 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm13097-201ENSMUST00000210722 397 ntBASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Gm5950-201ENSMUST00000213337 772 ntBASIC12.07□□□□□ -0.48
Sh2d1bO35324 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh2d1bO35324 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh2d1bO35324 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms