Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.03□□□□□ -0.8
Ebi3O35228 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.03□□□□□ -0.8
Ebi3O35228 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Gm27437-201ENSMUST00000183429 107 ntBASIC10.03□□□□□ -0.8
Ebi3O35228 Mir6392-201ENSMUST00000184924 108 ntBASIC10.03□□□□□ -0.8
Ebi3O35228 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.03□□□□□ -0.8
Ebi3O35228 Gm44069-201ENSMUST00000204898 506 ntBASIC10.03□□□□□ -0.8
Ebi3O35228 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.03□□□□□ -0.8
Ebi3O35228 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ebi3O35228 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
Ebi3O35228 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ebi3O35228 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ebi3O35228 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ebi3O35228 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.02□□□□□ -0.8
Ebi3O35228 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Ebi3O35228 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.02□□□□□ -0.8
Ebi3O35228 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Ebi3O35228 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ebi3O35228 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Gm12859-201ENSMUST00000117834 427 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.02□□□□□ -0.81
Ebi3O35228 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Gm2495-201ENSMUST00000191160 466 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 AC155286.1-201ENSMUST00000218632 448 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Gm18473-201ENSMUST00000220543 868 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.02□□□□□ -0.81
Ebi3O35228 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ebi3O35228 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Ebi3O35228 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Ebi3O35228 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.02□□□□□ -0.81
Ebi3O35228 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Ebi3O35228 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ebi3O35228 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ebi3O35228 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.01□□□□□ -0.81
Ebi3O35228 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ebi3O35228 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.01□□□□□ -0.81
Ebi3O35228 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.01□□□□□ -0.81
Ebi3O35228 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ebi3O35228 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.01□□□□□ -0.81
Ebi3O35228 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Ebi3O35228 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Ebi3O35228 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC10.01□□□□□ -0.81
Ebi3O35228 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ebi3O35228 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms