Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.19□□□□□ -0.46
Hps1O08983 Gm6266-201ENSMUST00000203844 806 ntBASIC12.19□□□□□ -0.46
Hps1O08983 Gm45668-201ENSMUST00000211271 493 ntBASIC12.19□□□□□ -0.46
Hps1O08983 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.19□□□□□ -0.46
Hps1O08983 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.19□□□□□ -0.46
Hps1O08983 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Mir125a-201ENSMUST00000083545 68 ntBASIC12.19□□□□□ -0.46
Hps1O08983 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.19□□□□□ -0.46
Hps1O08983 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hps1O08983 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hps1O08983 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.19□□□□□ -0.46
Hps1O08983 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hps1O08983 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.18□□□□□ -0.46
Hps1O08983 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Mir7085-201ENSMUST00000184353 66 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hps1O08983 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Gm37714-201ENSMUST00000194742 342 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Gm6007-201ENSMUST00000208170 823 ntBASIC12.18□□□□□ -0.46
Hps1O08983 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Hps1O08983 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.18□□□□□ -0.46
Hps1O08983 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Pck2-205ENSMUST00000226352 2784 ntBASIC12.18□□□□□ -0.46
Hps1O08983 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.18□□□□□ -0.46
Hps1O08983 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hps1O08983 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hps1O08983 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hps1O08983 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.17□□□□□ -0.46
Hps1O08983 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hps1O08983 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hps1O08983 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.17□□□□□ -0.46
Hps1O08983 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hps1O08983 Gm4984-201ENSMUST00000115987 360 ntBASIC12.17□□□□□ -0.46
Hps1O08983 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms